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Table 1 Microarray data sets that were used in this study and their experimental design

From: Predicting involvement of polycomb repressive complex 2 in direct conversion of mouse fibroblasts into induced neural stem cells

Experiment

Comparison

Accession number

Description

Matusi et al. (2012) [2]

Adult fibroblasts-derived neurosphere (iNSC1) versus adult skin fibroblasts

GSE31598

INSC1 sample is very similar to EB-derived secondary neurosphere. This comparison was used as primary data for our analysis

Thier et al. (2011) [3]

Three iNSC colons versus mouse embryonic fibroblasts (MEFs)

GSE36484

iNSC2, iNSC3, and iNSC5 colons compared with MEF.

Han et al. (2012) [4]

5 F-iNSCs versus mouse fibroblasts

GSE30500

Best result for direct conversion achieved when combinations of five TFs were used.

Ring et al. (2102) [5]

Two clonal lines of iNSCs versus mouse embryonic fibroblasts (MEFs)

GSE37859

Direct reprogramming of mouse fibroblast into iNSCs using Sox2 transcription factor.