Table 1 Classification of biological functions in heatmaps according to GO categories
From: Analyses of the pericyte transcriptome in ischemic skeletal muscles
Name | GO ID | GO name |
|---|---|---|
Skeletal muscle development (Fig. 5e) | 1902725 | Negative regulation of satellite cell differentiation |
1902810 | Negative regulation of skeletal muscle fiber differentiation | |
0048632 | Negative regulation of skeletal muscle tissue growth | |
1902811 | Positive regulation of skeletal muscle fiber differentiation | |
0048743 | Positive regulation of skeletal muscle fiber development | |
0048633 | Positive regulation of skeletal muscle tissue growth | |
2001014 | Regulation of skeletal muscle cell differentiation | |
0048742 | Regulation of skeletal muscle fiber development | |
0048631 | Regulation of skeletal muscle tissue growth | |
0048741 | Skeletal muscle fiber development | |
0045214 | Sarcomere organization | |
0048769 | Sarcomerogenesis | |
0030241 | Skeletal muscle myosin thick filament assembly | |
0033292 | T-tubule organization | |
0007520 | Myoblast fusion | |
0014904 | Myotube cell development | |
0014908 | Myotube differentiation involved in skeletal muscle regeneration | |
0010832 | Negative regulation of myotube differentiation | |
0010831 | Positive regulation of myotube differentiation | |
0010830 | Regulation of myotube differentiation | |
0098528 | Skeletal muscle fiber differentiation | |
1901740 | Negative regulation of myoblast fusion | |
0060299 | Negative regulation of sarcomere organization | |
0060298 | Positive regulation of sarcomere organization | |
0060297 | Regulation of sarcomere organization | |
0014866 | Skeletal myofibril assembly | |
Neurogenesis (Fig. 5g) | 0014013 | Regulation of gliogenesis |
0010001 | Glial cell differentiation | |
0016322 | Neuron remodeling | |
0014041 | Regulation of neuron maturation | |
Cell cycle (Fig. 5h) | 0010564 | Regulation of cell cycle process |
1901976 | Regulation of cell cycle checkpoint | |
0007346 | Regulation of mitotic cell cycle | |
Vasculogenesis (Fig. 6a) | 0035441 | Cell migration involved in vasculogenesis |
2001212 | Regulation of vasculogenesis | |
0060312 | Regulation of blood vessel remodeling | |
1904752 | Regulation of vascular associated smooth muscle cell migration | |
1901432 | Regulation of vasculature development | |
1990936 | Vascular smooth muscle cell dedifferentiation | |
1905651 | Regulation of artery morphogenesis | |
1904753 | Negative regulation of vascular associated smooth muscle cell migration | |
0045765 | Regulation of angiogenesis | |
0002040 | Sprouting angiogenesis | |
0120078 | Cell adhesion involved in sprouting angiogenesis | |
VEGF (Fig. 6b) | 0048010 | Vascular endothelial growth factor receptor signaling pathway |
Effect of endothelial cells (Fig. 6c) | 1901509 | Regulation of endothelial tube morphogenesis |
0045601 | Regulation of endothelial cell differentiation | |
0001936 | Regulation of endothelial cell proliferation | |
Response to ischemia (Fig. 6d) | 0002931 | Response to ischemia |
Cell junction organization (Supplementary Fig. 3a) | 0034330 | Cell junction organization |
Regulation of cell adhesion (Supplementary Fig.3c) | 0030155 | Regulation of cell adhesion |
Extracellular matrix (Supplementary Fig.3b) | 0030199 | Collagen fibril organization |
0085029 | Extracellular matrix assembly | |
0001952 | Regulation of cell-matrix adhesion | |
Leukocyte activation (Supplementary Fig.3d) | 0045321 | Leukocyte activation |