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Table 1 Drugs targeting the BCR-ABL1-independent survival pathways

From: Chronic myeloid leukemia stem cells: targeting therapeutic implications

Drug

Target

Result

Reference

Targeting autophagy

Chloroquine (CQ)

Autophagy

Make CML LSCs susceptible to TKI-mediated apoptosis by blocking lysosome–autophagosome fusion and promoting cellular stress

[244]

Spautin-1

 Autophagy 

Apoptosis of CML cells via inactivation of the PI3K/AKT pathway and downregulation of anti-apoptotic proteins

[245]

Lys05 (A lysosomotropic drug)

 Autophagy gene

Decrease in LSC quiescence and facilitation of myeloid cell growth

[246]

PIK-III

The class III phosphatidylinositol 3-kinase, a vacuolar protein sorting 34 (VPS34)

Reduction of primary CML LSCs numbers

[246]

Targeting surface antigens

IL-1R antagonist

Interaction of interleukin 1 and its receptor

Inhibition of IL-1 signaling (NF-κB) and growth of CML LSC and also sensitize them to nilotinib

[247]

Anti-IL-1RAP antibody

IL-1RAP: Co-receptor of the interleukin 1 receptor (IL1R1)

Killing CML cells and increase in survival of murine xenograft through inhibition of IL-1B signaling and induction of ADCC in CML

[248, 249]

CAR T cell against IL1RAP

  IL-1RAP: Co-receptor of the interleukin 1 receptor (IL1R1)

Inhibition of IL-1 signaling (NF-κB) causing antileukemic effects

[250]

vildagliptin

CD26 (DPP4)

Decrease in disease expansion through modulating the dysfunctional SDF1/CXCR4 axis to limit mobilization and niche escape of LSCs

[251]

CAR T cells against CD26

 CD26 (DPP4)

 Decrease in disease expansion through modulating the dysfunctional SDF1/CXCR4 axis to limit mobilization and niche escape of LSCs

[252]

Drug-conjugated anti-CD33 antibody

CD33

Death of most LSCs in CP-CML resulted from the quick internalization and release of the conjugated drug in the acidic environment of lysosomes and its binding to DNA, resulting in DNA double-strand breaks

[38, 253]

Anti-CD44 antibody

CD44

Inhibition of the adhesion to BMM and dormancy of the LSCs

[254]

IL-3-toxin fusion protein SL-401 (Tagraxofusp)

IL-3R

Antileukemic activity by inhibition of cell growth and induction of cell apoptosis

[255, 256]

CAR T cell against IL-3R (CD123)

 IL-3R

 Antileukemic activity by inhibition of cell growth and induction of cell apoptosis

[257, 258]

Anti-CD70 antibody

CD70 (CD27L)

Decrease in expression of CD27 and WNT target genes leading to elimination of human CML progenitor/stem cells in combination with imatinib

[143]

Targeting the interactions with BMM

NOX-A12

CXCL12

Prevents LSCs homing and causes TKI sensitization

[259]

Plerixafor (AMD3100)

CXCR4

  Prevents LSCs homing and causes TKI sensitization

[260]

Acriflavine

HIF-1

The antileukemic response by the modulation of STAT3/5 signaling

Decrease in c-MYC and stemness-related genes (e.g., NANOG, SOX9, and OCT4), and increase in the expression of tumor suppressors (e.g., P57, P19Arf, and P16Ink4a)

[261]

[93, 181]

Thiazolidinediones (TZD) such as Pioglitazone (the anti-type 2 diabetic medication)

PPARγ

Reduction in the STAT5 activity

Inhibition of LSC infiltration and localization to the BMM by upregulation of matrix metalloproteinase-9 (MMP-9) and MMP-2

Induction of LSC apoptosis by activation of caspase-3

[182]

Rosiglitazone

 PPARγ

Induction of LSC apoptosis associated with the increased expression of the stearoyl-CoA desaturase 1 (SCD1), phosphatase, and tensin homolog (PTEN), and P53

[262]

Clofazimine

Physical interaction with PPARγ to regulate its transcriptional activity

The induction of NF-kB-p65, resulting in P65 destruction, downregulation of peroxiredoxin-1 and increased ROS-induced apoptosis

Proteasomal degradation

Downregulation of dormancy and self-renewal of CML LSC by suppression of STAT5 expression and consequently downregulation of stem cell maintenance factors (HIF-1α/2α and CBP/P300/CITED2)

[263]

Targeting signaling pathways

Farnesyl transferase inhibitors (FT-Is) such as Tipifarnib and Lonafarnib

Protein farnesyltransferase

Preventing the proper functioning of the Ras

[264, 265]

BP1001 (liposome-incorporated antisense oligodeoxynucleotide)

Growth factor receptor-bound protein 2 (GRB2) (a potent activator of ERK1 and ERK2)

Inhibition of RAS/MEK/ERK pathway

[185]

Trametinib

MEK

Suppression of the MEK/ERK and NF-κB-mediated survival of CML LSCs

[186]

ETC-1907206

MAPK interacting protein 1 and 2 (MNK1/2)

Inhibition of the MAPK interacting protein 1 and 2 (MNK1/2)-eukaryotic initiation factor 4E (eIF4E) pathway and activation of β-catenin

[266]

Dactolisib (NVP-BEZ235)

PI3K and mTOR

Inhibition of CML cell proliferation by triggering autophagy and apoptosis

[267]

Pictilisib (GDC0941)

PI3K

 Inhibition of growth and survival of resistant CML cells by induction of apoptosis

[268]

KU-0063794

mTORC1/2

 Antiproliferative or proapoptotic effects by inhibiting activation of AKT  and other protein kinases

[268]

Rapamycin (sirolimus)

mTOR

Induction of cell growth arrest and apoptosis and a reduction in cell proliferation

[269]

Everolimus (RAD001)

 mTOR

 Induction of cell growth arrest and apoptosis and a reduction in cell proliferation

[270]

Pimozide

STAT5

A reduction in the proliferation of CML CD34+ cells induction of cell cycle arrest and apoptosis

[126]

Ruxolitinib (RUB)

JAK2

Decrease in JAK2/STAT5 activity, reactivation of PP2A

[121]

Fedratinib (TG101348)

  JAK2

  Decrease in JAK2/STAT5 activity, reactivation of PP2A

[271, 272]

10,058-F4

c-MYC

Promotion of an apoptosis by PP2A reactivation and modulation of autophagy

[273]

OP449

SET

Reactivate PP2A and apoptotic pathways in a PP2A-dependent manner leads to depletion of the LSCs by inhibiting STAT5

[192]

FTY720

 SET

  Reactivate PP2A and apoptotic pathways in a PP2A-dependent manner leads to depletion of the LSCs by inhibiting STAT5

[191]

BP-5087

STAT3

Overcome independent survival and drug resistance of LSCs

[197]

IFN-α

Activation of STAT1/5

Differentiation and exhaustion of CML stem cells by the upregulation of FAS-R

[196]

PRI-724 (ICG-001)

β-catenin/TCF mediated transcription (WNT/β-catenin signaling)

The disruption of the interaction between CBP and β/γ-catenin, leading to a decrease in self-renewal capability in leukemia-initiating cells in CML

[198, 274]

Misoprostol

PGE1

Activation of this PGE1-EP4 pathway and inhibition of TCF1/LEF1 and FOS/FOSB in WNT signaling

[132]

Niclosamide

Interaction between the FOXM1/β-catenin/NF-Kb

Impairs the ability of CML LSCs to survive and self-renew

[200]

WNT974

PORCN (O-acyl transferase)

Inhibition of WNT signaling suppression of c-MYC, cyclin-D1 and Axin-2 expression, contributing to an increase in the inhibition of proliferation and eradication of CML stem cells

[127, 128]

Cyclopamine

SMO

Eradicating Hh-mediated self-renewal capacity of CML LSC stimulates CML LSCs to cell cycle and become sensitive to TKIs

[202]

LDE225 (sonidegib)

  SMO

  Eradicating Hh-mediated self-renewal capacity of CML LSC stimulates CML LSCs to cell cycle and become sensitive to TKIs

[203]

Glasdegib (PF-04449913)

  SMO

  Eradicating Hh-mediated self-renewal capacity of CML LSC stimulates CML LSCs to cell cycle and become sensitive to TKIs

[204]

Vismodegib

  SMO

  Eradicating Hh-mediated self-renewal capacity of CML LSC stimulates CML LSCs to cell cycle and become sensitive to TKIs

[205]

Targeting energy metabolism

SR-18292

PPARγ coactivator-1α (PGC-1α)

Increase in PGC-1 acetylation, The downregulation of mitochondrial oxidative metabolism

Increase in apoptosis of CML CD34+CD38– cells

[106]

Tigecycline

mitochondrial metabolism

Impairment of mitochondrial protein synthesis and mitochondrial respiration

[56]

Subutoclax

BCL2

Disruption of energy metabolic pathways and decrease in oxidative phosphorylation levels, resulting in increase in CML LSCs eradication

[208, 209]

Venetoclax

LY25528

BLT2

Inhibition of ALOX15 pathway

Inhibition of self-renewal in TKI-resistant CML cells by induction of apoptosis

[211]

Zileuton

ALOX5

Decrease in the survival of CML LSCs in mice

[33]

QLT0267

Integrin-linked kinase (ILK)

Induction of metabolic vulnerabilities by the reduction in the CD36 expression

[212]

Targeting the epigenetic modification

DS-5272

MDM2

The reactivation of P53, silencing ant-iapoptotic MCL-1 and sensitive quiescent CD34+ cells to therapy

[215]

Panobinostat (LBH589)

HDAC

Increase in TKI-mediated apoptosis by acetylating HSP90 and increasing proteasomal degradation of key signaling proteins in CML LSCs

[141, 216]

Chidamide

  HDAC

Induction of apoptosis by increasing acetylation of histone H3, activation of caspase 3/9, reduction in the β-catenin levels and its downstream targets surviving (a WNT–CBP–β-catenin-regulated gene), and c-MYC

[217, 218]

MAKV-8

  HDAC

Reduction in the c-MYC expression and the stimulation of caspase 3/9 and ER stress, all of which contribute to LSC eradication

[219]

Tenovin-6

SIRT1

Increase in apoptosis by increase acetylation of P53

[220, 221]

PJ-68

PRMT5

Induction of CD34+CD38− cell apoptosis by inhibiting the WNT/β-catenin pathway and inducing negative control on LSC renewal

[222, 223]