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Table 3 Computational target gene predictions

From: The effects of microRNAs on human neural stem cell differentiation in two- and three-dimensional cultures

   DIANALAB microT v3.0 PicTar TargetScan
miRNA Target gene Rank miTG score Precision SNR Target sites/genes found Score Aggregate PCT
hsa-miR-96 SOX5 2 64.73 1 7.3 1214/763 6.74 0.94
hsa-miR-183 DUSP10 1 26.44 0.72 1.62 302/190 4.75 0.85
hsa-miR-302a NR4A3 27 19.86 0.84 6.22 863/473 3.05 NF
hsa-miR-182 FOXN3 3 37.4 0.94 6.87 1358/794 NF 0.96
hsa-miR-7 NR4A3 NF NF NF NF NF 1.61 0.17
hsa-miR-7 FOXN3 7 14.08 0.17 1.03 399/136 NF 0.88
hsa-miR-20a NR4A3 9 26.13 0.85 9.44 1650/841 5.87 0.63
hsa-miR-20b NR4A3 11 25.60 0.9 9 1955/973 5.87 0.63
hsa-miR-17 NR4A3 13 25.85 0.9 7.94 1928/961 5.38 0.63 + 0.37
hsa-miR-20a EIF4G3 3 55.29 0.97 9.44 1650/841 NF NF
hsa-miR-20b EIF4G3 1 46.9 0.94 8 1955/973 NF NF
hsa-miR-17 EIF4G3 1 46.87 0.94 7.94 1928/961 NF NF
  1. List of miRNA target-prediction mRNAs. MiRNAs, and target-predictive genes were identified by algorithms analysis by using Diana Lab, PicTar, and TargetScan. Scores (aggregate) are provided for each analysis.
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Stem Cell Research & Therapy

ISSN: 1757-6512