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Table 1 Primers used for PCR in this study

From: Stimulation of Activin A/Nodal signaling is insufficient to induce definitive endoderm formation of cord blood-derived unrestricted somatic stem cells

Gene

Primer sequences 5'-3'

PCR type

Annealing temp. (°C)

Cycle number

Amplicon size (bp)

ACVR1a

ACVR1a-F

TAA GCG TCA CAC TGC CAA AG

Real-time

60

40

89

 

ACVR1a-R

GTC ACT GGG GTA CTC GGA GA

    

ACVR1b

ACVR1b-F

TGC AAC AGG ATC GAC TTG AG

Real-time

60

40

121

 

ACVR1b-R

TGA GGA CAG GAG GAA CAC C

    

ACVR1c

ACVR1c-F

TGG TCT GGC ACA CCT TCA TA

Real-time

60

40

137

 

ACVR1c-R

TCA CAG CCA ACC CTA AGT CC

    

ACVR2a

ACVR2a-F

GCG TTT GCC GTC TTT CTT AT

Real-time

60

40

138

 

ACVR2a-R

TGT CAC CAT AAC ACG GTT CAA

    

ACVR2b

ACVR2b-F

CTC CTC TGG GGA TCG CTG T

Real-time

60

40

137

 

ACVR2b-R

CTT GTC CTG CTC GCC TTC

    

Brachyury

Brachyury-F

GAA CCA GCA CCC TGT GTC CAC

Standard

55

38

608

 

Brachyury-R

GCC ACG ACA AAA AGT CAC TGC

    

CFTR

CFTR-F

ACT TTA AAG CTG TCA AGC CGT G

Standard

35

30

1051

 

CFTR-R

CAT CAT AGG AAA CAC CAA A

    

CFTR (nested)

CFTR-NF

AGC TGT CAA GCC GTG TTC TAG ATA

Nested

45

30

140

 

CFTR-NR

ATG AGG AGT GCC ACT TGC AAA

    

FOXA2

FOXA2-F

GGG AGC GGT GAA GAT GGA

Standard

55

35

89

 

FOXA2-R

TCA TGT TGC TCA CGG AGG AGT A

    

GAPDH

GAPDH-F

ATG GAG AAG GCT GGG GCT C

Real-time and standard

60

40

196

 

GAPDH-R

AAG TTG TCA TGG ATG ACC TTG

    

MixL1

MixL1-F

CCG AGT CCA GGA TCC AGG TA

Standard

55

35

58

 

MixL1-R

CTC TGA CGC CGA GAC TTG G

    

Nestin

Nestin-F

CAG CTG GCG CAC CTC AAG ATG

Standard

55

35

209

 

Nestin-R

AGG GAA GTT GGG CTC AGG ACT GG

    

SPC

SPC-F

AGC CAG AAA CAC ACG GAG AT

Standard

57

30

456

 

SPC-R

AGT GGA GCC GAT GGA GAA G

    

SPC (nested)

SPC-NF

AAC GCC TTC TTA TCG TGG TG

Nested

57

30

313

 

SPC-NR

GTG AGA GCC TCA AGA CTG G

    

Sox17

Sox17-F

GGC GCA GCA GAA TCC AGA

Real-time

60

40

61

 

Sox17-R

CCA CGA CTT GCC CAG CAT

    

TTF1

TTF1-F

ACC AGG ACA CCA TGA GGA AC

Standard

50

38

116

 

TTF1-R

GCT CAT GTT CAT GCC GCT