Gene | Primer sequences 5'-3' | PCR type | Annealing temp. (°C) | Cycle number | Amplicon size (bp) | |
---|---|---|---|---|---|---|
ACVR1a | ACVR1a-F | TAA GCG TCA CAC TGC CAA AG | Real-time | 60 | 40 | 89 |
ACVR1a-R | GTC ACT GGG GTA CTC GGA GA | |||||
ACVR1b | ACVR1b-F | TGC AAC AGG ATC GAC TTG AG | Real-time | 60 | 40 | 121 |
ACVR1b-R | TGA GGA CAG GAG GAA CAC C | |||||
ACVR1c | ACVR1c-F | TGG TCT GGC ACA CCT TCA TA | Real-time | 60 | 40 | 137 |
ACVR1c-R | TCA CAG CCA ACC CTA AGT CC | |||||
ACVR2a | ACVR2a-F | GCG TTT GCC GTC TTT CTT AT | Real-time | 60 | 40 | 138 |
ACVR2a-R | TGT CAC CAT AAC ACG GTT CAA | |||||
ACVR2b | ACVR2b-F | CTC CTC TGG GGA TCG CTG T | Real-time | 60 | 40 | 137 |
ACVR2b-R | CTT GTC CTG CTC GCC TTC | |||||
Brachyury | Brachyury-F | GAA CCA GCA CCC TGT GTC CAC | Standard | 55 | 38 | 608 |
Brachyury-R | GCC ACG ACA AAA AGT CAC TGC | |||||
CFTR | CFTR-F | ACT TTA AAG CTG TCA AGC CGT G | Standard | 35 | 30 | 1051 |
CFTR-R | CAT CAT AGG AAA CAC CAA A | |||||
CFTR (nested) | CFTR-NF | AGC TGT CAA GCC GTG TTC TAG ATA | Nested | 45 | 30 | 140 |
CFTR-NR | ATG AGG AGT GCC ACT TGC AAA | |||||
FOXA2 | FOXA2-F | GGG AGC GGT GAA GAT GGA | Standard | 55 | 35 | 89 |
FOXA2-R | TCA TGT TGC TCA CGG AGG AGT A | |||||
GAPDH | GAPDH-F | ATG GAG AAG GCT GGG GCT C | Real-time and standard | 60 | 40 | 196 |
GAPDH-R | AAG TTG TCA TGG ATG ACC TTG | |||||
MixL1 | MixL1-F | CCG AGT CCA GGA TCC AGG TA | Standard | 55 | 35 | 58 |
MixL1-R | CTC TGA CGC CGA GAC TTG G | |||||
Nestin | Nestin-F | CAG CTG GCG CAC CTC AAG ATG | Standard | 55 | 35 | 209 |
Nestin-R | AGG GAA GTT GGG CTC AGG ACT GG | |||||
SPC | SPC-F | AGC CAG AAA CAC ACG GAG AT | Standard | 57 | 30 | 456 |
SPC-R | AGT GGA GCC GAT GGA GAA G | |||||
SPC (nested) | SPC-NF | AAC GCC TTC TTA TCG TGG TG | Nested | 57 | 30 | 313 |
SPC-NR | GTG AGA GCC TCA AGA CTG G | |||||
Sox17 | Sox17-F | GGC GCA GCA GAA TCC AGA | Real-time | 60 | 40 | 61 |
Sox17-R | CCA CGA CTT GCC CAG CAT | |||||
TTF1 | TTF1-F | ACC AGG ACA CCA TGA GGA AC | Standard | 50 | 38 | 116 |
TTF1-R | GCT CAT GTT CAT GCC GCT |