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Table 3 Top diseases and biological functions from the IPA knowledge base that involve proteins differentially expressed in young compared with old chondrogenic, tenogenic and osteogenic constructs classified as diseases and disorders, molecular and cellular functions and physiological system development and function

From: A proteomic analysis of chondrogenic, osteogenic and tenogenic constructs from ageing mesenchymal stem cells

Construct

 

p-value

No. molecules

Diseases and disorders

   

 Chondrogenica

Inflammatory Response

1.14E-03 - 1.05E-08

34

Developmental Disorder

7.11E-04 - 5.32E-08

33

Skeletal and Muscular Disorders

5.85E-04 - 5.32E-08

46

Cancer

1.21E-03 - 1.37E-07

112

Organismal Injury and Abnormalities

1.21E-03 - 1.37E-07

113

 Tenogenica

Cancer

1.26E-18 - 1.84E-03

173

Organismal Injury and Abnormalities

1.26E-18 - 1.96E-03

136

Reproductive System Disease

1.26E-18 - 1.84E-03

104

Immunological Disease

2.13E-12 - 5.18E-04

61

Respiratory Disease

2.78E-12 - 3.26E-04

48

 Osteogenicb

Infectious Disease

2.00E-05 - 1.54E-02

19

Developmental Disorder

4.83E-05 - 1.14E-02

8

Hereditary Disorder

4.83E-05 - 1.25E-02

11

Metabolic Disease

4.83E-05 - 1.14E-02

10

Neurological Disease

4.83E-05 - 1.77E-02

18

Molecular and cellular functions

   

 Chondrogenica

Cell Death and Survival

1.05E-03 - 2.51E-15

67

Cell Morphology

1.21E-03 - 7.47E-14

50

Cellular Movement

1.24E-03 - 8.51E-12

52

Cell-To-Cell Signalling and Interaction

1.21E-03 - 8.55E-12

45

Cellular Assembly and Organization

1.24E-03 - 8.63E-12

49

 Tenogenica

Cellular Movement

3.79E-20 - 2.14E-03

85

Cellular Growth and Proliferation

1.50E-18 - 1.91E-03

109

Cell Death and Survival

1.91E-15 - 2.04E-03

98

Cellular Assembly and Organization

1.62E-14 - 2.20E-03

85

Cellular Function and Maintenance

1.62E-14 - 2.20E-03

87

 Osteogenicb

Cell Morphology

2.33E-06 - 1.71E-02

19

Lipid Metabolism

2.42E-05 - 1.71E-02

6

Small Molecule Biochemistry

2.42E-05 - 1.72E-02

17

Molecular Transport

2.94E-05 - 1.71E-02

22

Protein Trafficking

2.94E-05 - 2.94E-02

5

Physiological system development and function

   

 Chondrogenica

Connective Tissue Development and Function

1.21E-03 - 2.75E-10

45

Tissue Development

1.24E-03 - 3.83E-09

60

Organismal Survival

1.18E-04 - 7.09E-09

47

Haematological System Development and Function

1.24E-03 - 1.05E-08

29

Immune Cell Trafficking

1.24E-03 - 1.05E-08

27

 Tenogenica

Tissue Development

1.98E-08 - 2.22E-03

79

Haematological System Development and Function

1.25E-07 - 1.47E-03

35

Immune Cell Trafficking

1.25E-07 - 1.47E-03

32

Cardiovascular System Development and Function

2.08E-07 - 2.11E-03

30

Skeletal and Muscular System Development and Function

3.87E-07 - 2.11E-03

47

 Osteogenicb

Nervous System Development and Function

2.33E-06 - 1.80E-02

12

Organ Morphology

7.75E-05 - 1.71E-02

15

Reproductive System Development and Function

7.75E-05 - 1.71E-02

7

Tissue Development

1.15E-04 - 1.71E-02

16

Cardiovascular System Development and Function

2.05E-04 - 1.59E-02

14

  1. aSignificant DE proteins with p < 0.05, q < 0.05 and ±2-fold change
  2. bSignificant DE proteins with p < 0.05 and ±2-fold change
  3. DE differentially expressed, IPA ingenuity pathway analysis