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Table 3 ∆C t values for target genes (target C t – β2-microglobulin C t )

From: Human umbilical cord mesenchymal stromal cells exhibit immature nucleus pulposus cell phenotype in a laminin-rich pseudo-three-dimensional culture system

Sample

Aggrecan

Collagen II

ITGα6

ITGα3

ITGβ4

CD239

Control

      

 Day 1

21.1 ± 0.7

17.6 ± 0.2

14.6 ± 1.0

8.7 ± 1.0

11.2 ± 0.5

13.3 ± 0.4

 Day 7

23.4 ± 0.3

18.3 ± 0.3

16.1 ± 0.9

7.4 ± 0.4

10.6 ± 0.3

14.7 ± 0.5a

TGF-β1

      

 Day 1

19.8 ± 0.4

18.0 ± 0.8

15.5 ± 0.2

9.9 ± 0.2

11.3 ± 0.2

13.3 ± 0.2

 Day 7

18.9 ± 0.4

17.3 ± 0.7

16.9 ± 0.9

7.7 ± 0.5a

9.6 ± 0.4a

14.7 ± 0.5a

IGF-1

      

 Day 1

20.0 ± 0.5

16.8 ± 0.6

15.0 ± 0.9

9.1 ± 0.6

11.0 ± 0.2

12.8 ± 0.3

 Day 7

19.8 ± 0.5

18.0 ± 0.7

15.8 ± 0.2

7.1 ± 0.4a

10.0 ± 0.4a

14.6 ± 0.5a

  1. Values represent mean ± standard deviation of all RT-PCR replicates for n = 4 RNA samples. Control values (in bold) at day 1 are used to normalize all data as follows: ∆Ct values of control at day 1 are subtracted from ∆Ct values of control at day 7 or ∆Ct values of each treatment group at both day 1 and day 7 to obtain ∆∆Ct and the fold-difference of relative mRNA levels (2–∆∆Ct) for each target as illustrated in Figure 2. IGF-1, insulin-like growth factor-1; ITG, integrin; TGF, transforming growth factor.
  2. aFold-difference between day 1 and day 7 samples ≥2 and P <0.05, one-factor analysis of variance followed by Tukey’s post-hoc analysis.